October 12, 2008

Catching up on reviewing science books

A few books that I've read in 2008 that haven't quite made it into their own reviews:

Gawande, Atul. Complications: A surgeon's notes on an imperfect science. New York: Picador, 2003. 288pp.

This is a very fine book that I recommend without hesitation. Gawande has to be one of the absolute best popular writers about medicine of all time. This book is a collection of essays that were published in other places, mostly The New Yorker. The theme of the first section of the book is the fallibility of doctors, how they need to learn about their craft by basically practicing on us, and the ethical and practical dilemmas that all of us face because of this simple facts. We all want to be operated on by the most experienced surgeons, of course. But how did those surgeons get experienced in the first place? The rest of the book more or less picks up on those themes as it covers some medical mysteries and some things that the medical profession doesn't really understand yet.

This is a must-have for any academic or public library and I can imagine medical libraries building whole exhibits and and other collection focus activities around the work of Atul Gawande.



Shermer, Michael. Why Darwin matters: The case against Intelligent Design. New York: Holt, 2007. 199pp.

Another very fine book. Noted sceptic Michael Shermer basically demolishes the Intelligent Design and creationist paradigms from start to finish, but he also does it in a rather ecumenical way, taking care not to burn bridges or overly offend. You can get an idea of what he covers from the chapter titles: The Facts of Evolution, Why People Do Not Accept Evolution, In Search of the Designer, Debating Intelligent Design, Science Under Attack, The Real Agenda, Why Science Cannot Contradict Religion, Why Christians and Conservatives Should Accept Evolution and The Real Unsolved Problems in Evolution.

Shermer also weaves in his own personal story about how he evolved from being a Christian creationist himself to his current position supporting evolution, as well as his experiences at the Dover trial.

A solid, informative book, even if it's occasionally marred by Shermer's own descents into theistic gobblydegook, such as on page 43, "If we think of God as a thing, a being that exists in space and time, it constrains God to our world, a world of other things and other beings that are also constrained by the laws of nature and the contingencies of chance. But if God is the maker of all things and all beings visible and invisible in heaven and earth, God must be above such constraints: that is, above the laws of nature and contingencies of chance." A good rationalization for believers, I guess, but it does undermine some of his other arguments.

Overall, I'd recommend this book to most public libraries and any academic library that collects popular science.

I would like to close with another quote, from page 161.

Darwin Matters because evolution matters. Evolution matters because science matters. Science matters because it is the preeminent story of our age, an epic saga about who we are, where we came from and where we are going.




Angier, Natalie. The canon: A whirligig tour of the beautiful basics of science. New York: Mariner, 2008. 293pp.

Natalie Angier is a well-known science writer for the New York Times and in this book has produced a very fine explanation of what science is all about. She also covers an awful lot of territory giving an overview of the current state of the art in various of the scientific fields.

But the most important contribution of the book is the first few chapters where she basically gives an layperson's introduction to the philosophy of science. She talks about the scientific method, the role of probability in science and the role of measurement, all very important topics in understanding what science is. I think it's important to mention that her approach is in sharp contrast to Bill Bryson's A Short History of Nearly Everything, which tended to use a more historical narrative, concentrating on the eccentricities of the various scientists he profiled to give colour. Bryson really didn't discuss any philosophy or have any extensive discussion of the scientific method, to the book's great detriment I believe. Angier seems to have learned from Bryson's mistakes, both in giving that philosophical and mathematical underpinning as well as not portraying scientists as freaks and weirdos.

The rest of the book is given over to a quick overview of physics, chemistry, evolutionary and molecular biology, geology and astronomy. It's quite dense and perhaps potentially a bit dry, but she mostly avoids that with a lively sense of humour sprinkled with quite a bit of flashy wordplay. This aspect of the book came under a fair bit of criticism from other reviewers, but I think it works quite well. Granted, she does goes overboard on occasion -- sometimes it seems that every paragraph needs to end with a little zinger.

Did I learn anything? Yes, I did. Quite a bit really. On the frivolous front, it seems that Angier and I share the same passion for collecting bookmarks. Who knew?

I would recommend this book to any academic or public library. Even high school or middle school libraries would be able to find readers for this book.

October 10, 2008

Getting a job 2.0

It's interesting times in the world out there.

And not surprisingly, the world of the internet is thinking about the implications. One of the big implications is that it's going to be harder to get a job, and that's going to be true librarians as much as anyone else.

As it happens, I've been collecting some links on my FriendFeed lately that talk about getting yourself ready to find a job. (Not that I'm looking for a job myself, more from the point of view of someone who is occasionally on search committees.) How to prepare a CV, how to improve your online repuation, etc.

Robert Scoble's So, you need a job? Man, do resumes suck which has a lot of pointers for how to make your resume and job application stick out. The comments are great too. I'm including some of the main points, please read the whole very fine post for the details:

So, now how do you get into the final two or three pile which is what will earn you an interview? You need to stand out from the crowd somehow. Here’s some ways to do that.

1. Blog. ... Make sure your blog’s content matches the job you are applying for, though. If someone had a blog showing how to be a better administrative assistant you can bet that I’d read every word.

2. Include a customized video that demonstrates your skills and personality.

3. Demonstrate you did some research on us.

4. Make sure you write for a human, but include tags and things for electronic scanners too.

5. Don’t just apply for the job, apply for the career.

6. Demonstrate that you’d be fun to have around.

7. Make sure your email[/cover letter] is perfect in every way.


Next up is Shannon Paul's Six Steps to Resume 2.0, which are also great suggestions. Here's his conclusion -- and since most libraries are at least trying to integrate social media into our offerings I think it's very relevant for looking for a library job:
My thinking is that if you want to work with social media for a living, showing and teaching others about your involvement will mean a lot more than another bullet point outlining your accomplishments. Waiting for everyone else to "get it" won’t work.

What are some other ways we can build bridges for the uninitiated? Can you think of other ways to start tweaking your resume for Web 2.0?


Finally, Dave McClure's The 4 Things You Really Need: LinkedIn, Blog, Keywords, Social Media. These are great ideas, perhaps a bit too out there for the staid world of academia, but I assure you any one or two of these would make you absolutely stand out from most of the other applicants. The main ideas, with details in the post:
1) get a LinkedIn profile, and pimp it out -- HARD.

2) write a regular blog

and...

3) ABSOLUTELY DOMINATE selected keywords (the ones that matter to you or others).

4) create notable online social media ( video, pictures, presentations, etc) relevant to your line of work and link [to] them / embed them on your blog, your LinkedIn profile, and other online sites.


Just today I got an email from someone who was asking about career opportunities in science librarianship. One of the great things about having a blog is that you do get these "out of the blue" questions, where people ask your advice and I think it's a privilege to be able to reach out and hopefully help someone. This is what I told her:
Also, in terms of making yourself more marketable, I would really try and get a solid online professional presence for yourself. It doesn't have to be a blog, but you really need to show that you're aware and interested in the new stuff that's happening. Nature Network, FriendFeed, LinkedIn and others are really valuable places to build your reputation.

And that's essentially the same advice I would give to anyone, particularly new graduates who might not have a lot on their resume yet. Any advantage you can give yourself is an edge. I've been on numerous search committees at my institution and it's always odd to see someone applying for a job in the 21st century for a technology focused job in a technologically focused profession who has no structured, consistent online presence. I want to know who you are, what you've done and what you think and even what other people think about you -- make it easier for me. Blow me away.

Friday Fun: World's largest wargaming table art installation

I'm not even a wargamer myself, but the work of Timothy Hutchings is really cool:

Via BoingBoing.

October 8, 2008

ScienceOnline '09: Register while there's still time!

As of right now, there are 171 people registered for the ScienceOnline '09 conference (January 16-18 in Research Triangle Park, NC), the successor conference to the North Carolina Science Blogging Conference. The maximum for the venue is apparently about 200, so the waiting list will be starting up pretty soon. It's quite the stellar lineup of attendees with many notable names from the science and blogging worlds; a quick browse through the registration list will give you an idea of who's scheduled to come. I'm looking forward to a great mix of people I met last year and people I've always wanted to meet. Bora Zivkovic is profiling attendees and highlighting programming tracks over at his blog.

And speaking of the program, it's really shaping up this year to be very interesting with a good variety of interesting sessions.

As it happens, Christina Pikas and I will be doing a session (so far scheduled for Sunday morning):

A. How to search scientific literature – moderated by Christina Pikas and John Dupuis:

There are so many nifty tricks and strategies for searching the literature that an average scientist is not aware of. So: Ask the experts – the science librarians!

We'll be fleshing that bare-bones description out a bit more as the event approaches.

So, as is obvious by now, I'll be there, this time accompanied by my older son, Sam, who's really interested in all things scientific. There don't seem to be too many librarians who are registered yet that I can see, so I'd encourage the library crowd out there to consider attending. It's a great conference with many valuable insights into how science people are changing their ways in the Internet era.

October 5, 2008

Interview with Dorothea Salo of Caveat Lector

Welcome to the latest installment in my occasional series of interviews with people in the library, publishing and scitech worlds. This time around the subject is Dorothea Salo, Digital Repository Librarian at University of Wisconsin-Madison and author of the blog Caveat Lector. Dorothea is well known for her role in the institutional repository and scholarly communications communities; she's the author of the widely read eprint on IRs "Innkeeper at the Roach Motel," forthcoming in the Fall 2008 Library Trends.

Thanks to Dorothea for her provocative and thoughtful responses. Enjoy!


Q0. Hi Dorothea, would you mind telling us a little about yourself and how you ended up as Digital Repository Librarian at University of Wisconsin-Madison?

After burning out of Ph.D candidacy in Spanish a decade ago, I landed a job doing SGML work and typesetting for a publishing-services bureau serving scholarly publishers and university presses. I also took part in the ebook boomlet of the early 2000s, working on the content specification put out by the (then-)Open eBook Forum. In so doing, I met Allen Renear (then at Brown, now at Illinois/Urbana-Champaign), who has been a mentor and friend ever since.

When the ebook market decayed like the rest of the dot-com boom, I looked around to see who else was doing digitization in a halfway-responsible fashion, and where I could apply such skills as I had usefully. That led me to the UW-Madison's library school. I owe immense gratitude to the UW Survey Center, which turned my full-time job into a half-time project assistantship that paid all but the last semester of my tuition.

On graduating in 2005, I hunted several different sorts of jobs, the entry-level library job market being what it is. The job I landed was the inauguration of the institutional repository at George Mason University in Fairfax VA just outside DC.

Now, Mason is a wonderful place with fantastic colleagues and I loved working there. Unfortunately, DC can be a soul-sucking place to live in; it and I just weren't a good fit for each other. So when the repository-manager position opened at the University of Wisconsin, I searched my soul, consulted with my husband, and applied. I'm so happy to be home in Madison again!


Q1. Recently on FriendFeed Steve Lawson asked people what they would like to be interviewed on. Here's your chance. So, what do you think about "libraries' feasible and proper roles in scholarly communication?"

I think a lot of things. I think the institutional repository was a noble and worthwhile experiment, but as a tool for redressing the imbalances in the scholarly-communication system, it is a failure. It may be reborn if the Harvard experiment succeeds, but that very much remains to be seen. This doesn't mean that I think IRs are useless; they don't have to be, though they often are. It does mean that we're going to have to go after the serials crisis in other ways.

I think we libraries have a lot of market power that we are not using properly. I've heard publishers talk about their industry, and what they invariably say is "we will follow the money." That means libraries; as individual subscriptions dwindle, WE are the ones with the money. They'll follow us -- but we aren't leading them toward open access. We're squealing like stuck pigs about the stalemate, yes, but we're not reallocating any of our serials funds to support gold open access. I think this is a serious mistake.

I think I know why we're doing it; it's the same old story about serving our patrons as best we can with the resources we have. (Librarians have a bit of a martyr complex sometimes.) There is also a serious and ugly undercurrent of anti-OA backlash among faculty; maybe Alma Swan hasn't seen it, but I sure have. Librarians trifle with that at our peril, and we know it. So we sigh, and put every cent we have toward subscriptions, and feel backed against the wall.

Even so -- we HAVE stood our ground once or twice, and the publishers blinked. I am thinking of the stand against the Big Deal of three or four years back. We came out of that well, as hard as it must have been to contemplate at the time. We could have and should have built on that -- but we didn't. I want to see us cancelling overpriced journals, regardless of their impact factors or usage statistics, and standing up to faculty when they ask why. We need to say "no" loudly and clearly more often, and we need to divert some of the serials money we save thereby to gold open access. (Some should go back to monographs, of course.)

As a matter of strategy, then, the open-access movement needs to target serials and e-resources librarians with requests for support of gold OA. SPARC needs to take a hard look at propagandizing (for example) NASIG and the Charleston Conference. CNI isn't anywhere near enough, and ALA conferences revolve around the status quo.

I think some of us have futures as publishing support specialists. Open
Journal Systems isn't going away. I don't know how big this will become,
truthfully, but I do know that I trust librarians a lot more than I trust
other potential and actual players in this space. Big-pig publishers lost
credibility as scholarship's dutiful handmaidens long ago, and I'm nearly
as cynical about scholarly societies, which had their chance to stand with
us but stuck by the big pigs instead. A pox on both their houses; if the
scholarly societies are right and open access sinks some of them, I'm
perfectly baffled as to why I as a librarian should care.

I think all of this boils down to one theme, which I have seen expressed in several distinct contexts: librarians cannot remain the warehouse at the end of the train tracks, as we historically have been. We have to become part of the whole process. We're not used to that, but there's tremendous potential in it for us.


Q2. How did get started blogging and what keeps you going?

Ah, yes. I started blogging in 2002, after a nasty contretemps with my then-employer. The said employer hired me because I was a notable voice in the field at the time. Good public relations, don't you know. During the negotiation process, the employer assured me that they had no interest in stifling my editorial voice; being associated with me was enough of a marketing tool.

Yes, I was stupid to believe it. What can I say? I'd been out of the fishbowl of graduate school barely two scant years, and (believe it or not) I tend to believe the best of people until I have my nose rubbed in how wrong I am. The inevitable happened, of course; I wrote and published something that outraged them, they nearly fired me over it, and it scared me badly enough to find another job.

And start blogging. I hadn't run out of things to say, some of them controversial or even damaging, and I understood finally that I needed a place to say them that was clearly and unequivocally mine, firewalled off from employers. The firewall is, shall we say, somewhat permeable and not always as effective as I'd like, but it's worked well enough for the purpose. And I've learned some things too about where the appropriate boundaries are -- which isn't to say I don't still cross them now and again!

What keeps me going? Well, to be stone-cold selfish about it, blogging is the most productive professional activity I engage in, even though I don't actually do it at work! Directly or indirectly, it's sent me abroad twice, gotten me several "wanna write a book?" invitations, several article gigs, and similar opportunities. It's not all gravy; it may have cost me a job once, and I've also noticed that some people are cautious about approaching me professionally because of my pugnacious blog demeanor. (To them I say: yes, I can occasionally be difficult, but far from always, and I try to be worth the trouble!) Roach Motel may actually manage to eclipse CavLec as the first thing librarians know about me as a professional librarian, but we'll see.

Truthfully, the professional notoriety is a pleasant side-effect, but it's not why I blog. I still have things to say, things I can't say at work or in the professional literature. The blog reaches far more people, and a far greater variety of people, than balkanized and toll-access-firewalled professional publication can. I find the blogging form useful for thinking through systems and phenomena I don't fully understand. And I can also express my joy in great blue herons and art festivals and music.


Q3. I find it interesting that you don't allow comments on your blog but at the same time there's often a quite lively conversation on FriendFeed? What's your rationale for not allowing comments on the blog itself?

I've addressed this on CavLec many a time; I think I need to put permalinks for those posts in the sidebar. For all my pugnacity, I am easily frightened and stressed by open conflict, especially in some of the horrendously nasty and frankly evil forms the Internet tends to foster (notably against technical-minded women). I don't want to deal with that in my space. I don't want to become the next Kathy Sierra. I don't want to go through the angst some of my fellow librarian bloggers have with out-of-control comment threads, trolls, and threats.

There's a counterargument, and a good one: my public blog-face is a good deal meaner and wronger than it would be if I had commenters to call me in public on my garbage. Unfortunately, if I threw open comments to all, I shortly wouldn't have ANY public face, because it isn't just the wise and sensible commenters calling me on my garbage who would show up.

There are also bad counterarguments concerning the effect of comments on a blog's popularity. Sure, I coulda been a contenda in the blogosphere if I'd enabled comments. I don't care about being a contenda, and never have. People come to me now and then asking how to write a popular blog; one or two have even asked me how to make money with a blog, though I've never knowingly allowed so much as the teensiest text-ad on mine. (CavLec did get hacked by linkspammers once, but I cleaned that up as soon as I found out about it.) I never answer such people. I don't know and I don't care. That isn't why I blog.


Q4. And why do you think FriendFeed tends to foster more and better commentary that the comments section for most blogs?

Partly because communities self-select. Partly because the FF signup barrier, minor though it is, is sufficient deterrence to eliminate random trolls as well as pack-mobbing. Partly because feed owners can fence their feeds off by making them semi-private (as I have done with my FF) and by hiding or blocking people who get out of line. Partly because FF threads are ephemeral enough not to attract attention whores the way popular comment-enabled blogs do.

I caution adopters that a "private" FF should not be considered private, even if you strictly control whom you permit to see your feed (and I don't). You never know who's going to squeal on you (I learned that one in grad school), so behave yourself. Still, by and large FF is an immense improvement over blog comments.


Q5. Once upon a time, faculty used to come to the library every week or so to check new journals. You could ask them questions, get their input, etc. How do you think libraries and libraries can still reach out to such an important constituency in the age of Google and ejournals?

Get out of the library! QED. Mohammed and the mountain. The health-sciences library director at MPOW has made a career of this to fantastic effect, and I respect him a great deal for it. He doesn't wait to be invited to faculty meetings; he invites himself. By the third meeting, they expect him to be there and value his input -- which is only natural, because he's incredibly sharp and knowledgeable.

What's holding us back from that? Two things, honestly. One is the reference desk, which is an incredible timesink. (Resolved: Librarians can no longer afford to provide synchronous in-person assistance; the ROI is insufficient. Discuss. Now discuss it in the context of other professions, such as law and medicine.) The other barrier is libraries' unbelievably bad habit of holding too many library-internal meetings. Get librarians OUT of those and INTO faculty meetings, and watch faculty learn to value us again.

There's lots of other stuff floating about with regard to embedding librarians in the research process, as we're doing with information literacy and teaching, and I'm all for that and hope to become an embedded librarian someday myself. None of that changes the fundamental proposition: since they won't come to us, we have to go to them. Not hat in hand, not begging -- we walk in as professionals with plenty of value to offer.

And if we can't think of any value we offer, we've got way worse problems than faculty not coming into the library!


Q6. I guess I have to ask a question about IRs: if you could get one message across to faculty at your institution about Institutional Repositories, what would it be?

Asking questions about IRs is such a drag. ;)

Faculty specifically? "Let me help you."

Frankly, though, a more productive message would be directed at my fellow librarians, and would read "I can't do this without you. Help me."


Q7. In terms of the future of IRs over the next, say, five years, what would the best and worst case scenarios be?

Worst case is easy: they are defunded and die. Harvard delayed that, but I don't think they have prevented it. If the software remains obtuse and difficult, if the goals remain socio-culturally impractical, if the services remain under-resourced and poorly understood, IRs are doomed. At a good many institutions, I believe this is inevitable, still; it's just going to take a little longer than I initially thought. The five-year time horizon you specify should suffice.

Best case: IRs shift from "warehouse at the end of the digital train tracks" to a set of services and systems that manage, safeguard, and shepherd the digital products of the research process all the way through, soup to nuts. We have successful examples of this already, particularly in Australia, and Europe is starting to build them as well. In this country, I suspect they aren't going to grow out of IRs -- they'll be part of the funder-initiated and IT-spearheaded movement to cope with research data locally. This is my warning call to libraries: if we're not in on these discussions, we'll be shut out of the resulting services, and that's bad for all concerned. I have heard some stunningly ignorant statements about data curation from IT people at MPOW -- but on the plus side, at least I'm in on those conversations!


Q8. The scholarly publishing landscape is changing pretty quickly these days. What major changes do you see happening in the next few years in terms of some of the major issues such as journal publishing, publishers' business models, the role of scholarly societies, and the open access movement?

You don't ask small questions, do you? (Yeah, well, they're the only ones really worth asking. -John)

I honestly have no idea what the major changes will be, because so far, major changes in this realm have been discontinuous and out-of-the-blue. I didn't predict the Big Deal backlash. I didn't dare predict the trajectory of the NIH public-access policy, and I'd be stupid to predict who might or might not follow their example. I didn't predict Harvard, and I frankly can't so much as guess who will follow Harvard, or even if anyone will. California's experience is the stern warning here, and extrapolating a guess from MPOW, while it could be interesting, doesn't pass my internal sniff test for reliability.

Part of the reason I can't predict these things is that I'm not invited into the right smoke-filled rooms; players in this game tend to play their cards close to their chests, so I have no way of finding out what they're thinking. Part of the reason is that the outcome of any given individual process, as the NIH policy trajectory demonstrates, is fairly random!

All that leaves me with is the obvious. The publishing lobby will continue its stunning mendacity, largely though not entirely unopposed by rank-and-file publishers. There will be more open-access journals. It is likely to become harder to assert that open-access journals are unsustainable, but that won't stop the publishing lobby from trying -- and it won't stop a few gold journals from folding, either. We will continue to argue about citation advantages, and just what a citation is worth. Faculty will continue to feel whipsawed by all this.


Q9. What role so you think social software/web 2.0 will play in all this?

In "The Social Journal," a presentation I gave for publishers in 2006, I argued that in becoming disciplinary markers and quality arbiters, journals gave up the power and usefulness of unmediated, un-gatekept communication, and that is what researchers are now finding on the Web. The long and short of it is that I still think this.

What's happening now is that some of this communication, since it isn't ephemeral the way a hallway chat at a conference is, is being recognized as holding some sort of scholarly value. Young-turk tenure-trackers want their blogs to be included in their tenure-and-promotion packages. Digital humanists of varying stripes are clamoring for their rightful place. Scientists are asking themselves about communicating with the public as a service obligation. Pieces of the scholarly-valuation process, such as
publication lists and citation tracking, are moving into machine-readable forms on the Web.

The sticky wicket is that none of this directly assails the journal or the monograph yet. (This enabled me to make my 2006 presentation utterly non-threatening to my audience, which both they and I appreciated.) Cultural norms and standards in academia are what they are, and it will be a long time -- probably my lifetime -- before they shift appreciably. I do think some of the smaller problems, such as citation and credit for datasets, will be solved relatively quickly. The larger problems, such as the fragmentation and mutability of online conversations and the difficulty of persisting them, are here to stay.

In the main, then, promotion and tenure will happen as they pretty much have for the last century or so, and the outside conversation will happen outside that process, as it generally has. That conversation is becoming more visible and more persistent, and that makes me happy because I don't approve of the way the toll-access world shuts out the public from the research conversation. Call me a curmudgeon if you will, though, but I don't believe the visibility and persistence of that conversation is game-changing.

Though I could be wrong...

October 3, 2008

Friday Fun: The IgNobels are here!

I've been posting about the annual IgNobel prized for years (2002, 2003, 2004, 2005, 2006, 2007). This year's "laureates" have just been announced.

As usual, they're hilarious. My favourite is:

BIOLOGY PRIZE. Marie-Christine Cadiergues, Christel Joubert,, and Michel Franc of Ecole Nationale Veterinaire de Toulouse, France for discovering that the fleas that live on a dog can jump higher than the fleas that live on a cat.

REFERENCE: "A Comparison of Jump Performances of the Dog Flea, Ctenocephalides canis (Curtis, 1826) and the Cat Flea, Ctenocephalides felis felis (Bouche, 1835)," M.C. Cadiergues, C. Joubert, and M. Franc, Veterinary Parasitology, vol. 92, no. 3, October 1, 2000, pp. 239-41.


And there's always room for a runner up!
PHYSICS PRIZE. Dorian Raymer of the Ocean Observatories Initiative at Scripps Institution of Oceanography, USA, and Douglas Smith of the University of California, San Diego, USA, for proving mathematically that heaps of string or hair or almost anything else will inevitably tangle themselves up in knots.

REFERENCE: "Spontaneous Knotting of an Agitated String," Dorian M. Raymer and Douglas E. Smith, Proceedings of the National Academy of Sciences, vol. 104, no. 42, October 16, 2007, pp. 16432-7.

WHO ATTENDED THE CEREMONY: Dorian Raymer


(Saw it first via Eva.)

September 30, 2008

Thomson Scientific still trying to predict the Nobel Prizes

Over the last couple of years (here, here, here), I've been razzing Thomson Scientific about their lame attempts to predict the science & economics Nobel Prizes. Last year, they predicted every single prize incorrectly.

Well, they're at it again. I won't go into detail again how misguided I think their attempts are to use their citation counts to predict the outcome of the prizes. However, I will list their predictions for this year so I can once again point to them as the prizes are awarded to show how useless something like citation counts can be for this kind of purpose.

Here goes.

Chemistry

  • Charles M. Lieber
  • Krzysztof (Kris) Matyjaszewski
  • Roger Y. Tsien


Economics
  • Lars P. Hansen and Thomas J. Sargent and Christopher A. Sims
  • Martin S. Feldstein
  • Armen A. Alchian and Harold Demsetz


Physics
  • Andre K. Geim and Kostya Novoselov
  • Vera C. Rubin
  • Sir Roger Penrose and Dan Shechtman


Physiology or Medicine
  • Shizuo Akira and Bruce A. Beutler and Jules A. Hoffmann
  • Victor R. Ambros and Gary Ruvkun
  • Rory Collins and Sir Richard Peto


So, let's see how they do this year. I predict about the same as previous years, in other words, pretty random. Some of the people they pick based on citation counts will be picked in the year Thomson guesses, some won't. Some will get picked in a later year. It's interesting, as a way a hedging their bets Thomson lists some of the previous years' "citation laureates" at the bottom of the page.

Once again, I would also like to emphasize that I have nothing against the scholars whom Thomson has "nominated" and wish them well. I certainly don't mean to cast a negative light on their contributions at all. My beef is not with them, but with Thomson's misuse of their citation data.

September 29, 2008

Scott Rosenberg Traces the Blogosphere’s Origins

Simon Owens was kind enough to let me know about his interview with Dreaming in Code author Scott Rosenberg on the MediaShift blog.

Dreaming in Code was one of the best books I read in 2007 and I'm really looking forward to next summer when Rosenberg publishes his forthcoming book on the history of blogs and blogging, the topic of the interview:

Speaking with Rosenberg about his book, I felt like we were discussing evolutionary biology. Rosenberg’s research goes beyond highlighting the earliest blogs, and slowly pieces its way through the primordial ooze of the Internet, tracing a line of websites in the early 1990s that first began taking on blog-like characteristics.

"Most of the people I’ve talked to, I’ve asked who had inspired them," he said. "Who were you reading when you decided to start blogging? To a certain point that becomes a harder and harder thing the further back you go. For instance, Justin Hall started his site in January 1994, before most of us had heard of the web. I asked him, 'Well, you’re one of the first bloggers, was there anyone out there who you were getting inspiration from?' And he pointed me to this other guy named Ranjit Bhatnagar who was keeping a site at moonmilk.com in 1993. And, sure enough, it was a reverse chronological list of stuff he found on the web."


It sounds like it's going to be a great book. Rosenberg has interviewed over 100 bloggers for the book, which should give him a good feeling for what's going on. My only hope is that he doesn't stop at the obvious choices for blogging communities to feature -- technology and US political blogs -- and explores some of the more niche communities, like, for example, science blogs or library blogs. Even parenting or knitting blogs or anything, just to give his readership the idea that the blogospheres are incredibly diverse and vibrant rather than just technophilia and political ranting.

In any case, Rosenberg talks about the new book here and the MediaShift interview here.

September 26, 2008

Friday Fun: What black arts could have stripped this chocolate of its natural hue?

As may have become apparent over the years, I've long been a fan of HP Lovecraft and always enjoy bringing Lovecraftian humour to light (or is that to dark?) (here, here and here, for example).

I saw this one via Katy Southern on FriendFeed: Selections from H.P. Lovecraft's Brief Tenure as a Whitman's Sampler Copywriter.

They're all funny, here's one of them as a taste (hehe):

Coconut Creme Swirl

They say that the Coconut Creme Swirl sleeps. But if the dread Coconut Creme Swirl slumbers, surely it must also dream. It is certain that while it dozes the Coconut Creme Swirl is absorbed by terrifying visions of exacting its creamy tropical vengeance upon mankind! Consume the Coconut Creme Swirl before it awakens to consume you!

Communications of the ACM, Oct 2008

Some interesting articles from v51i10:

September 23, 2008

IEEE Annals in the History of Computing, July/Sept 2008

Lots of interesting articles, as usual, in this special issue on Methods and Challenges in the History of Informatics, v30i3:

Science in the 21st Century conference recap

As I mentioned in a previous post, I was at the Science in the 21st Century conference at the Perimeter Institute for Theoretical Physics in Waterloo, Ontario for the week of September 8th. The conference location was terrific. The PI's building is a great site for a small conference, the food in the Black Hole Bistro was fantastic and the PI library is small but very nice and really starting to grow.

Overall, it was a fantastic experience, one that will take a long time to properly digest. I'm not going to bother with session summary posts for a couple of reasons. First of all, videos of nearly all the sessions are available; second, the FriendFeed room has an amazing amount of really good microblogging about the conference. You can really get the essence of the sessions. Chad Orzel of Uncertain Principles has also blogged a bunch of very good sessions summaries. There was hardly one single bad or even mediocre presentation at the entire conference; it's well worth the time to watch several of them. The organizers should be proud of assembling such a fine roster of speakers.

There's also a good compilation of blog reactions on the conference site.
Before I forget, there's a really nice photo of most of the conference attendees available.

Since summary isn't that useful at this point, I thought I'd maybe talk a little about some of the main impressions I got out of the conference.

First of all, science 2.0/open science still are pretty minority interests and movements, with not much happening in the broader community yet beyond the early adopters. This seems to be mostly due to issues in incentives and workload. On the other hand, there's some very interesting stuff going on in some disciplines and with some scientists. I think there's enourmous possibilities for a sea change in the way science is both done and communicated over the next decade as the current crop of young scholars become the senior scholars in their various fields. In particular, today's undergrads and grads see open content and social networking the way fish see water.

So, everybody is grappling with the 2.0 stuff and it's hard to say if the science community is ahead or behind the curve. In some ways libraries and librarians are perhaps a bit ahead of the curve, if only because we see a train-like light at the end of the tunnel and are reacting by innovating and experimenting. You'd be hard pressed to find many large- or medium-sized academic libraries that aren't at least experimenting with some of the tools; some are even experiencing some success. On the other hand, if a library news blog posts in the forest and nobody reads it, does it really exist.

One thing that was pretty apparent at the conference was that libraries aren't really on most faculty members' radar, something that may be somewhat more true of the science 2.0 savvy types at the conference. But that's something we knew already. If faculty don't come to the library anymore -- and we've worked very hard to make sure that they really don't have to -- we might have to find other ways to let them know what we're doing and to engage them in what we have to offer.

As a result of our success (or joint success with publishers and OA advocates), faculty can tend to be somewhat unaware that their students still use and value the library. This trend may be more prevalent in disciplines with generally small numbers of majors, but I think is also be pretty widespread. It's going to be a challenge to both find our roles in the evolving context as well as make a case for that role with faculty and administrators.

Are we in danger of being shut out from the research process unless we find a way to be relevant -- research support, curation, advocating for and building the arxiv equivents for other disciplines? A difficult question without an obvious answer; I think part of it will be to continue to build on our relationships -- with information literacy and undergraduate education, moving into the ebook space, hosting journals, and as the place for good study space on most campuses. The good news is that for the most part people are willing to listen and give us a chance if we can get their attention. Since everyone is grappling with the implications of the web for science, there's certainly an openness to contributions from all quarters. There was about 20% librarians at the conference, something that I think most people noticed, even if they were somewhat mystified by our ubiquity. Perhaps some will go back to their institutions and drop by and see their own librarian to see what he or she is thinking about. A bunch of people asked me questions about the future of libraries and if my answers were a little fuzzy, well, there was a lot of fuzziness about the future of science and science institutions in the 21st century. In retrospect, I probably should have asked them what they thought libraries had to contribute.

The above may seem a bit pessimistic, but I can't say that I really feel that way at all, in fact if anything I'm optimistic. Sure, there are challenges but we would be mistaken if we thought that the scientists have raced past us and totally embraced all the possibilities of the web. Some them have perhaps raced past, some of them haven't embraced the web, some of the stuff we've done in the past is just just gone, some of the things we could do in the future will elude our grasp. But, change brings possibilities.

I like to quote myself sometimes from a long ago post on the future of science libraries:

I want to facilitate a future, one that is good for our patrons but one that also has me in it. And I think that's what we should all aspire to in our professional lives, to bringing about the best future we can imagine, for ourselves and our patrons.


(Still to come -- I might possibly get around to some brief session notes. I definitely have a post in the works with some more concrete ideas on engaging the science communities in online library social spaces but a lot of that stuff is still percolating.)

September 21, 2008

Computer science does not study the digital computer

A great post by Eugene Wallingford at Knowing and Doing on a topic that has long interested me: What is computer science and is it a science?

Computer science does not study the digital computer. Dijkstra told us so a long time ago, and if we didn't believe him then, we should now, with the advent of ideas such as quantum computing and biological computing.

Computer science is about processes that transform information. I see many naturally-occurring processes in the world. It appears now that life is the result of an information process, implement in the form of DNA. Chemical processes involve information as well as matter. And some physicists now believe that the universe as we experience it is a projection of two-dimensional information embodied in the interaction of matter and energy.

*snip*

I believe everything I've said here today, but that doesn't mean that I believe that CS is only science. Much of what we do in CS is engineering: of hardware systems, of software systems, of larger systems in which the manipulation of information is but one component. Much of what we do is mathematics: finding patterns, constructing abstractions, and following the implications of our constructions within a formal system. That doesn't mean computer science is not also science. Some people think we use the scientific method only as a tool to study engineered artifacts, but I think that they are missing the big picture of what CS is.


BTW, if you haven't already, feel free to take a look at the interview I did with Eugene a few months ago.

September 19, 2008

Friday Fun: Destroying the world...again

For some reason, the beginning of the school term has me thinking about apocalyptic ideas...first a few weeks ago and now today, thinking about whether or not the Large Hadron Collider has the destroyed the world yet. Check the link. And refresh every once in a while just to be sure.

Oh yeah, check out the hard-core LHC geekery at the Science in the 21st Century conference...

September 17, 2008

Sunburst Award: 2008 winners and 2009 jury

The winners have just been announced for the 2008 edition of the Sunburst Award, Canada's juried award for literature of the fantastic:

  • Young Adult: Anthem of a Reluctant Prophet by Joanne Proulx
  • Adult: The New Moon's Arms by Nalo Hopkinson

The complete short lists are here.

The reason I'm posting here, aside from the opportunity to celebrate great Canadian fantastic fiction, is to mention that I'm honoured to have been asked to serve on the jury for the 2009 award, along with Barbara Berson, Ed Greenwood, Sandra Kasturi and Simon Rose. It should be great fun. Needless to say, I don't expect to be reading much else other than Canuck fantastic fiction for the foreseeable future. However, I do hope to read at least two or three more science books this year.

Of course, I encourage everyone to check out the wonderful books on this year's short list as well as the two winners.

September 16, 2008

ScienceOnline '09

Bora has just announced that registration is open for the new, improved version of what was previously called the North Carolina Science Blogging Conference: ScienceOnline '09.

It uses the unconference format, so you can follow the evolution of the program here. As seems to be typical of many conferences these days, you can also see who's registered to attend -- 26 people already.

Here's some of the text from the homepage:

ScienceOnline’09 is the third annual science blogging conference, to be held Jan. 16-18, 2009 at the Sigma Xi Center in Research Triangle Park, NC.

Please join us for this free three-day event to explore science on the Web. Our goal is to bring together scientists, bloggers, educators, students, journalists and others to discuss, demonstrate and debate online strategies and tools for promoting the public understanding of science.

*snip*

Our conference addresses a variety of issues and perspectives on science communication, including science literacy, the popularization of science, science in classrooms and in homes, debunking pseudoscience, using blogs as tools for presenting scientific research, writing about science, and health and medicine.


I went to the conference last year and it was a truly great experience. I'm 99% certain I'll be going again this time around. I'll also very likely be taking my science blogger son with me as well.

September 14, 2008

Science in the 21st Century reading list

I spent the past week at the Science in the 21st Century conference at the Perimeter Institute in Waterloo, ON. It was a heck of a conference, an intense five days of workshops, discussions and social events. I'm still digesting what went on and trying to make a bit of sense of it, especially how it all relates to libraries. However, I'm not quite up to the task of getting all that down on pixels yet. I thought I'd first start by arranging some of my "to be read" list that I gleaned from various of the discussions.

As you can imagine, lots of books, articles and web sites were mentioned at the conference, which is no surprise, of course. A lot of the web sites and articles that were mentioned are listed in the various FriendFeed threads in the Science21 room. A bunch of books were also mentioned in a thread that Mark Tovey started. I thought it would be interesting to take Mark's thread as well as some notes that I made during the conference and make a nice list here. (Thanks to everyone who contributed to Mark's thread!)

You could do a lot worse job of preparing for the present and future of science and scientific communication than reading these books:


  • The Dream Machine : J.C.R. Licklider and the Revolution That Made Computing Personal by M. Mitchell Waldrop

  • Libraries of the Future by J.C.R. Licklider

  • Rethinking Expertise by Harry Collins and Robert Evans

  • Gravity's Shadow: The Search for Gravitational Waves by Harry Collins

  • American Physics and the Cold War Bubble by David Kaiser

  • Pedagogy and the Practice of Science: Historical and Contemporary Perspectives edited by David Kaiser

  • The Ghost of the Executed Engineer: Technology and the Fall of the Soviet Union by Loren Graham

  • Scientists in the Classroom: The Cold War Reconstruction of American Science Education by John L. Rudolph

  • The Sputnik Challenge by Robert A. Divine

  • Brainpower for the Cold War The Sputnik Crisis and National Defense Education Act of 1958 by Barbara Barksdale Clowse

  • Image and Logic: A Material Culture of Microphysics by Peter Louis Galison

  • QED and the Men Who Made It by Silvan S. Schweber

  • The Cold War and American Science: The Military-Industrial Complex at MIT and Stanford by Stuart W. Leslie

  • Towards 2020 Science

  • Bury the Chains: Prophets and Rebels in the Fight to Free an Empire's Slaves by Adam Hochschild

  • Sixty Days and Counting by Kim Stanley Robinson

  • Rainbow's End by Vernor Vinge

  • Here Comes Everybody by Clay Shirky

  • The Victorian Internet: The Remarkable Story of the Telegraph and the Nineteenth Century's On-Line Pioneers by Tom Standage

  • Collective Intelligence: Creating a Prosperous World at Peace edited by Mark Tovey

  • Anything by Lawrence Lessig

  • The Wealth of Networks by Yochai Benkler

  • Crowdsourcing by Jeff Howe

  • The access principle: The case for open access to research and scholarship by John Willinsky

  • Ambient Findabillity by Peter Morville

  • Everything Is Miscellaneous: The Power of the New Digital Disorder by David Weinberger

  • The Future of Reputation: Gossip, Rumor, and Privacy on the Internet by Daniel J. Solove

  • The Big Switch: Rewiring the World, from Edison to Google by Nicholas Carr

  • Community: The Structure of Belonging by Peter Block

  • The Cathedral & the Bazaar: Musings on Linux and Open Source by an Accidental Revolutionary by Eric S. Raymond

  • Dreaming in Code: Two Dozen Programmers, Three Years, 4,732 Bugs, and One Quest for Transcendent Software by Scott Rosenberg

  • The Logic of Collective Action: Public Goods and the Theory of Groups by Mancur Olson

  • Wikinomics: How Mass Collaboration Changes Everything by Don Tapscott and Anthony D. Williams

  • Scholarship in the Digital Age: Information, Infrastructure, and the Internet by Christine L. Borgman

Of course, a similar list or lists could be compiled for articles, web sites, videos, etc, but I'll leave that task to some one else. Books lists seem to be more my thing.

In any case, feel free to suggest more books either here or in the FriendFeed thread, especially if there were items from the conference, the FriendFeed or the video that I've forgotten.

September 7, 2008

Lacy, Sarah. Once you're lucky, twice you're good: The rebirth of Silicon Valley and the rise of web 2.0. New York,: Gotham, 2008. 294pp.

As with many of the business books I review in this space, I am profoundly torn by this book. On the one hand, tech journalist Sarah Lacy's account of the business side of the ride of various web 2.0 companies is compelling and fascinating reading. On the other hand, the depths of uncritical and nauseating hero-worship she displays toward the tech entrepreneurs she profiles is both revolting and disturbing.

Revolting because because of the over the top admiration and worship Lacy has for the people she profiles. Disturbing because the "it's all about the money" mindset diminishes the social impact, or at least my appreciation of the social impact, of the web 2.0 technologies.

In fact, if you're not careful reading this book could completely disillusion you about the whole web 2.0 phenomenon because it tears aside the veil and you see it for what the business people truly see it as: not a way of sharing and expanding our social horizons and making our true, real life social networks easier and more pleasurable. But as a way of making money, of delivering eyeballs to advertisers, of growing market share. Almost, but not quite. You really have to read this book with your business book brain engaged -- ignore the sycophanticism and hype and get a feeling for the stories and the personalities.

Some of the personalities/entrepreneurs she profiles include Max Levchin (PayPal, Slide), Mark Andreessen (Netscape, Ning), Jay Adelson (Digg) and, of course, Sarah Lacy's King of the World, Facebook's Mark Zuckerberg.

From the first chapter, focusing on Levchin, all the various entrepreneurs mostly come off as almost repulsively arrogant and greedy -- these social networking pioneers are no Robin Hood figures, it's all about the money. While their life stories are often interesting and even compelling, I find it hard to believe that they're actually as unpleasant as they seem in the book and for that I blame Lacy. She really needed to balance their stories of ambition with a more "human" side.

From a library point of view, one of the important ideas that I always try to keep first and foremost in my mind is that as public institutions (or private not-for-profits) it's not our job to deliver eyeballs to vendors or advertisers but to serve the interests of our patrons first. We should not make it our mission to deliver our patrons' attention to corporate interests. If nothing else, this book has reminded me that when we partner with vendors, even vendors we think have high ideals, we have to remember that their bottom line is ultimately different from ours.

In sum, this is a business book about business issues and mostly business people. There's a bit of analysis and reflection in some of the chapters, but you definitely won't learn much about what web 2.0 is and why it's important from this book. For that, definitely pick up Clay Shirky's book Here Comes Everybody. Is it all bad? No. Although superficial, I did pick up quite a bit of useful history and background on the web 2.0 phenomenon. I mostly enjoyed the book and would recommend it for any library that supports people studying the historical or business side of the web.

Some minor (and not so minor) things that annoyed me: Lacy's constantly using first names for her subjects giving and overly familiar air plus making it hard to keep track of which person she's talking about when it's a fairly large cast of characters. I also didn't appreciate that she referred to all the technical people as "engineers" -- may of whom were likely computer scientists, mathematicians or whatever. She didn't seem to have a sense that the job title engineer means someone that studied engineering. There were also a couple of uncomfortably misogynistic moments in the text (p. 42 and 226) that were unnecessary; Lacy seemed to be suffering a bit from The Stockholm Syndrome. She was also a bit flippant about the dark side of web 2.0, blowing off cyberbullying and copyright issues (p. 109).

September 3, 2008

Nature Network panel discussion & pub night

The Toronto Nature Network mafia are organizing another event this coming Sunday evening:

Science 2.0: the future of online tools for scientists
A pub night and panel with Timo Hannay, Cameron Neylon, and Michael Nielsen, hosted by Nature Network Toronto

What does the future hold for the way we do science? Are online repositories such as GenBank and the physics preprint ArXiv, or social tools such as Nature Network, about to change science profoundly? To find out, join Nature Network Toronto for an interactive panel discussion over drinks at the pub.

Date: Sunday September 7 at 7:30pm
Place: Fionn MacCool's (181 University Avenue, near corner with Adelaide)
Map: http://maps.google.com/maps?f=q&hl=en&geocode=&q=181+university+ave+toronto&sll=46.55886,-95.712891&sspn=34.760328,92.8125&ie=UTF8&z=16&iwloc=addr

About the panelists:

Timo Hannay is Publishing Director of Nature.com at the Nature Publishing Group, publishers of Nature and over seventy other scientific journals, plus numerous online resources for scientists. He is responsible for new online initiatives in social software, databases and audio-visual content. Timo trained as a neurophysiologist at the University of Oxford and worked as a journalist and a management consultant before becoming a publisher.

Cameron Neylon is a biophysicist working in molecular biology, biophysics, and high throughput methods. He has a joint appointment as a Lecturer in Combinatorial Chemistry at the University of Southampton and as a Senior Scientist in Biomolecular Sciences at the ISIS Pulsed Neutron and Muon Facility. He is developing an electronic notebook for biochemistry labs which has lead to his involvement in the Open Research movement and to his group moving to an Open Notebook.

Michael Nielsen is a writer living just outside Toronto, Canada. He is currently working on a book about The Future of Science. One of the pioneers of quantum computation, he coauthored the standard text on quantum computation that is the most highly cited physics publication of the last 25 years. He is the author of more than fifty scientific papers, including invited contributions to Nature and Scientific American.

For more information visit Nature Network Toronto (http://network.nature.com/group/toronto), or contact Eva Amsen (eva.amsen@gmail.com) or Jen Dodd (jen@jendodd.com)

It looks like a fun event, coinciding with the two of the panelists appearing at the Science in the 21st Century conference starting the next day. I'll be there, of course.

There is, of course, the obligatory Facebook event.

E-Science, Science 2.0, Open Science

Some recent posts that got me thinking about various escience/science 2.0/open science issues:

First, Christina gets us rolling with some definitions:

So I'm asking and proposing that e-science is

  • grid computing - using distributed computing power to do new computational methods in other areas of science (not in CS but in Astro, in bio, etc.)
  • data curation - using computing power and information science to store, discribe, and provide access to scientific information for reuse while taking security and policy issues into account
  • supporting scientists work using social computing technologies (SCTs) to support collaboration around data and equipment (as in collaboratories) as well as collaboration to find new research partners and to discuss science
  • maybe some sort of support for benchtop computational methods or support for workflow or electronic lab notebooks?

What do you think? Is it just one of these or all or some subset?


More or less, as I said on FriendFeed, I see the terms e-science, science 2.0 and open science bandied about quite a bit these days. I tend to thing of e-science as comprising grid computing and data curation issues. Science 2.0 I think of more as social software applications in science, including lab notebooks and the like.

Open science is a newer term, I think, and a little more nebulous to me. It's more an overarching attitude and approach rather than a set of tools. Certainly, open science includes aspects of grid computing, data curation and web 2.0 tools but all of the above don't necessarily have to be "open." It's possible to curate large data sets that are private, for example, or for a wiki lab notebook to be for the lab members only; e-science and and science 2.0 don't have to be fully open although, of course, it's infinitely preferable that they are.

So, I'm a little uncomfortable with using open science as a catch-all term for all the four items that Christina mentions, just as I'm a little uncomfortable with e-science as the catch-all. If I had to choose, though, I'd probably go with Christina and pick e-science.

And speaking of getting more openness into science, check out this article, Era of Scientific Secrecy Near End by Robin Lloyd.
Beyond email, teleconferencing and search engines, there are many examples: blogs where scientists can correspond casually about their work long before it is published in a journal; social networks that are scientist friendly such as Laboratree and Ologeez; GoogleDocs and wikis which make it easy for people to collaborate via the Web on single documents; a site called Connotea that allows scientists to share bookmarks for research papers; sites like Arxiv, where physicists post their "pre-print" research papers before they are published in a print journal; OpenWetWare which allows scientists to post and share new innovations in lab techniques; the Journal of Visualized Experiments, an open-access site where you can see videos of how research teams do their work; GenBank, an online searchable database for DNA sequences; Science Commons, a non-profit project at MIT to make research more efficient via the Web, such as enabling easy online ordering of lab materials referenced in journal articles; virtual conferences; online open-access (and free) journals like Public Library of Science (PLoS); and open-source software that can often be downloaded free off Web sites.

The upshot: Science is no longer under lock and key, trickling out as it used to at the discretion of laconic professors and tense PR offices. For some scientists, secrets no longer serve them.

The article is basically about using web 2.0 tools (blogs, wikis, mashups, collaborative document creation) to create a more open scientific culture. In other words, what I've called science 2.0 above. It's a very well-written article, particularly for an audience that might not be that familiar with the topic.

Of course it's great to have all these sharing and collaborative tools available for scientists to use, but how to you actually get more than a handful of them to use them? What's the killer app for science 2.0, in other words. Eva Amsen has some ideas!
Many, if not most, scientists are not in the habit of putting things online. The ones that are might be tempted by the concept of sharing the papers they read, letting everyone look at their lab notebook, joining a forum or writing a blog. If you’re reading this in your RSS feed or clicked through from FriendFeed , you’re probably one of those people. But think about your friends and colleagues who only turn on their computer for work and e-mail. They’re not going to tag their favourite papers or discuss the process of research with total strangers on the internet. It’s an extra thing to do that’s not already part of their lives, and no matter how appealing they might find the concept of open data or sharing information, they won’t join these sites or movements because it’s not something they are already doing.

*snip*

Imagine if there was a bibliography reference manager that keeps a record of papers read, and allows users to cite papers with one click of the mouse, but does all this in a simpler way than EndNote, and perhaps has one extra feature that people really need but that EndNote doesn’t have. For example: if you’re cowriting a paper with someone else, the EndNote library needs to be on two computers. You can export it, but it’s kind of unwieldy. It would be easier to have a common shared library that both computers could use to cite in their word processing software....

Now imagine if this utopian tool they all switched to because it was so simple and fast and useful just happened to come with the default setting to share your entire collection of papers and prompted to quickly tag everything once you added it. People would leave the public setting on, and they would tag....

Please, read the whole post. It's wonderful. Eva's idea is that the killer app for science 2.0 is combining citation management with document preparation and making it social. A great idea, because it takes what scientists have to do already (ie. write papers) and blows it up into the miscellaneous universe.

But, are we there yet? First of all, take a look at these two conversations on FriendFeed about how to make Connotea the killer app: here and here. It's great to know that Nature is thinking deeply about transforming what is now Connotea into something that will truly help scientists. At the same time, you have to think that the Zotero project also has great potential to be that killer app with amazing improvements in v1.5 and a social version coming up.

E-Resources Librarian, York University

Here's recent job posting from my institution. FYI, I'm not on the search committee, int he hiring department or anything so I don't have any specific info related to the job. If someone is interested in general information about York or the library system, that I could answer.

York University offers a world-class, modern, interdisciplinary academic experience in Toronto, Canada's most multicultural city. York is at the centre of innovation, with a thriving community of almost 60,000 faculty, staff and students who challenge the ordinary and deliver the unexpected.

York University Libraries are seeking an innovative and enthusiastic individual for the position of Electronic Resources Librarian in the Bibliographic Services Department. This is a tenure-track position for a librarian with up to nine years post-MLS experience.

Responsibilities:

The Electronic Resources Librarian will provide leadership and expertise in the effective acquisition, management and promotion of electronic collections for the Libraries. Working closely with the Associate University Librarian for Collections, the successful candidate will monitor trends and developments in electronic resources, collaborate with subject specialist/liaison librarians to identify potential new acquisitions, work with publishers and vendors to coordinate trials, and solicit and evaluate user feedback. In collaboration with library colleagues, the incumbent will develop and implement a dynamic promotion plan for the York community that raises awareness of and increases use of electronic collections. He/she will also develop and implement qualitative assessment measures, analyze and disseminate usage data, and prepare reports to assist in timely collections decision-making. The incumbent will assist in troubleshooting, responding to user inquiries and following up on access and maintenance problem resolution. He/she will participate in library-wide committees and will represent the Libraries at regional, provincial and national consortia (e.g. OCUL), organizations and initiatives.

Qualifications:


  • MLS (or recognized equivalent) from an ALA-accredited program
  • A high level of collection analysis, development and management expertise that includes negotiating and monitoring licensing agreements for electronic resources
  • Excellent skills in Excel, budget management and statistical tools
  • Demonstrated experience with OpenURL resolvers such as SFX
  • Knowledge of electronic resource management systems
  • Experience with current Web tools (syndication, mashups, etc.) and knowledge of discovery layers and next generation catalogues as potential channels for enhancing access to electronic resources
  • Demonstrated experience with project management
  • Excellent oral and written communication and training skills
  • Excellent organizational, analytical and interpersonal skills
  • Ability to work independently and in collaboration with others
  • Ability to manage a complex workload in a timely, effective manner with minimum supervision


Librarians at York University have academic status and are members of the York University Faculty Association bargaining unit (http://www.yufa.org/). The appointment, to commence May 1, 2009, is subject to budgetary approval. Salary and benefits are competitive.

York University is an Affirmative Action Employer. The Affirmative Action Program can be found on York’s website at www.yorku.ca/acadjobs or a copy can be obtained by calling the affirmative action office at 416-736-5713. All qualified candidates are encouraged to apply; however, Canadian citizens and Permanent Residents will be given priority.

Campus resources include an on-site daycare centre, a women's centre, a race and ethnic relations centre, a sexual harassment centre, initiatives in support of sexual and gender diversity, and a wellness centre. York University encourages attitudes of respect and non-discrimination toward persons of all ethnic and religious groups, regardless of gender or sexual orientation.

Preference will be given to applications received by December 19, 2008. Applications, including a covering letter relating qualifications to requirements of the position, a current curriculum vitae, and the names of three referees, should be sent to:

Chair, Electronic Resources Librarian Appointment Committee
York University, Scott Library, Room 310
4700 Keele Street, Toronto, ON M3J 1P3

Fax: (416) 736-5451

Applications should be sent by post or fax with original copy following. We do not accept applications sent by e-mail.

August 30, 2008

London Science Blogging Conference on Friendfeed

Boy, do I ever love Friendfeed.

You can follow what's going on at today's London Science Blogging Conference in its very own Friendfeed room. Each session has it's own thread with multiple people commenting on the proceedings. It actually gives a very good and surprisingly understandable impression of what's going on in the sessions. Most of the sessions have dozens of comments. Check it out.

You can also check me out on Friendfeed (join, you won't regret it). Michael Nielsen has also created a room for the upcoming Science in the 21st Century conference.

August 29, 2008

Friday Fun: End of the World!

I've never been a big fan of the "staff humans were not meant to know" genre of techno-thriller -- you know, Michael Crichton and his ilk.

But, done well, it can be pretty darn funny, in grim, morbid way.

In that vein, take a look at Cracked's The 5 Scientific Experiments Most Likely to End the World!

The article is quite extensive, with each experiment evaluated in terms of What Could Possibly Go Wrong, How Long Have We Got and overall Risk Level. Great stuff.

In any case, the experiments are, in descending order:

  1. Recreating the Big Bang
  2. The Quantum Zeno Effect
  3. Strange Matter
  4. Time Travel
  5. Nanotechnology

Interestingly (and ominously), most of the experiments involve the Large Hadron Collider.

I like this quote:
Basically the only thing that will save us from getting transformed into globulets of grey goo in a few years will be if the Large Hadron Collider kills us first.


(via Digg)

August 28, 2008

Popular science book meme

There's a popular science book meme going around -- I first saw it on Cocktail Party Physics, where it evolved from another meme, and it's appeared other places such as Uncertain Principles. I have to say, I don't do that well in these sorts of popular science reading lists because I tend not to read so much from, say, biology or chemistry and more from computing and technology. Those lists tend to really focus on physics, chemistry, biology and math.

So, I won't bore you with lists of books I have or haven't read from these other lists. What I will do is mention a bunch that I have read and really enjoyed that are computing related, including a novel. I don't intend for this to be a meme, but please feel free to mention computing, technology or other popular science books that you've enjoyed.

  • The Bug by Ellen Ullman
  • Close to the Machine: Technophilia and its discontents by Ellen Ullman
  • Dreaming in Code: Two dozen programmers, three years, 4,732 bugs, and one quest for transcendent software by Scott Rosenberg
  • Everything is miscellaneous by David Weinberger
  • Here comes everybody: The power of organizing without organizations by Clay Shirky
  • Ambient findability by Peter Morville
  • Information architecture for the world wide web by Louis Rosenfeld and Peter Morville
  • In the beginning was the command line by Neal Stephenson
  • Programmers at work, 1st series: Interviews by Susan Lammers
  • Understanding the professional programmer by Gerald M. Weinberg
  • Peopleware: Productive projects and teams by Tom DeMarco and Timothy Lister
  • Decline and fall of the American programmer by Edward Yourdon
  • Weaving the Web by Tim Berners-Lee with Mark Fischetti
  • Software conflict: Essays on the art and science of software engineering by Robert L. Glass
  • The mythical man-month : Essays on software engineering by Fred Brooks
  • Out of their minds: The lives and discoveries of 15 great computer scientists by Dennis Elliot Shasha and Cathy Lazere
  • In the beginning was the command line by Neal Stephenson
  • The sachertorte algorithm: And other antidotes to computer anxiety by John Shore

Another chip off the old blog

As I noted a while back, my older son Sam has his very own science blog, initially called Space Exploration and Us, which was a blog he created for school. He's now relaunched and renamed it Physics on my Mind. He tends to post intermittently, but it's well worth checking out his latest thoughts on the LHC.

Another chip, you say? That must mean that the other kid has a blog too?

That's right. My 13 year old son Daniel has started his own music review blog called Killer Tunes. Of course, I think it's great -- no way would I think it was a the work of a 13 year old. He's fairly good so far about adding content regularly although with various summer activities it's been pretty light recently. It's also interesting to note that we have an example of a teen that actually thinks in terms of CDs. Hmmm.

In any case, visit the blogs, leave a comment, encourage the next generation of bloggers!

August 25, 2008

Social Norms & Discovery on Friendfeed

This morning I posted this question on FriendFeed:

With a colleague I'm doing a kind of "social web for scholars" session later this week and, of course, I want to highlight Friendfeed. So I have a couple of questions for the assembled Friendfeed masses:

First, are there any emerging social norms for FF that I might want to mention, like how you decide to subscribe to people, what the protocol is for when people subscribe to you, etc. I'm just looking for impressions that people might have.

Second. When I came on, I already knew a bunch of Library & Science types that were already here so I could plug in pretty quickly. But say I'm a historian coming to FF for the first time and don't already have contacts. How do I connect with that community? I'm thinking of this in terms of demoing FF to a bunch of fairly random faculty who might have this particular question. Thanks!


So far so good. There's quite a few really good responses to my question. I was also wondering if all of you out there in the blogosphere might have any insights into Friendfeed that you might be willing to share, either here or on the original message.

When we're done, I'll post our material here.

August 22, 2008

Issues in Science & Technology Librarianship, Summer 2008

Check out the latest issue, with lots of very interesting articles. Here's a selection:



Readers of the Flaxbart article might want to read here for an extensive bibliography of studies to help sort out all the controversy.

Summer physics reading

I seem to have finished a bunch of popular physics / history of physics-type books in the last few months, so I thought I'd do a combined review of all of them. Especially since I really don't have too much to say about most of the individual titles. Except for the Pickover, I'd say that they're all slam-dunk acquisitions for any academic library that collects at all in popular or historical physics material.


Smoot, George and Keay Davidson. Wrinkles in time: Witness to the birth of the universe. New York: Harper Perennial, 2007. 331pp.

George Smoot won the Nobel Prize in physics in 2006 with John Mather "for their discovery of the blackbody form and anisotropy of the cosmic microwave background radiation." This book, originally published in 1994 and now republished to take advantage of Smoot's notoriety, tells the story of he and his teams efforts to discover that cosmic background radiation.

A very engaging book overall, it starts with a fairly extensive history of cosmology that covers several chapters. This is probably the weakest part of the book and it's a shame that many may have given up on the book during these fairly dry chapters. What's really engaging about the book and what makes it really worth reading is Smoot's story about the trials and tribulations of the various experiments his team devised and implemented. These included using spy planes and high altitude balloons and culminated in a trip to the Antarctic for one final experiment. All of those are great stories -- I thought the sections in Antarctica to be the best in the book and among the best descriptions of working science that I've ever read. They really should have been more foregrounded in the book. Overall, a great book.


Batterson, Steve. Pursuit of genius: Flexner, Einstein and the early faculty at the Institute for Advanced Studies. Wellesley: AK Peters, 2006. 301pp.

Another really fine book with a historical theme, this one strongly related to physics as well as math and other fields. This is a history of the Institute for Advanced Studies in Princeton, the place where Einstein worked when he moved to the US. In mostly concentrates on the early years of the institute until the 1960s then does a quick summer of more recent decades.

The early chapters are the story of Abraham Flexner, the founder of the Institute, and his inspirations and early efforts to get funding and get his dream up and running. This is easily the best part of the book, engaging and fascinating. It also functions as an intellectual history of the US in the early part of the 20th century. It also touches on the chicken-and-egg problem of getting the first few scholars to commit to the Institute.

Later chapters are devoted to the political wranglings of running an institute filled with scientific prima donnas as well as securing funding from governments and donors. These bits are considerably less compelling.

Overall, though, this is a fine book, one that I enjoyed quite a bit.


Pickover, Clifford A. Archimedes to Hawking: Laws of science and the great minds behind them. New York: Oxford University Press, 2008. 514pp.

Did this book make me smarter? Did I retain any of the massive amount of physics and chemistry I read about?

First of all, the idea behind Clifford Pickover's new book is to take a bunch of "laws of science & nature" that have been named after their most well known proponent (not necessarily the person who discovered the law) and explain them in a way suitable for a popular audience. Along with the explanation he also provides quite a bit of historical and biographical background on the law. The explanations are, on the whole, a little too detailed and technical for my liking however I'm probably not the ideal audience. Some of the bio & historical detail is pretty good, and some is pretty dry. However, I did read the book cover-to-cover and it is probably better to dip into rather than attempt comprehensiveness. One thing I would like to mention is that each law's section has a good bibliography of sources; my only complaint is that Pickover seemed to mostly consult books from his undergrad days -- ie. the reading lists tended on the older side. Another nice thing is that each section had two series of quotes, one directly about the law in question and the other with more general, and more provocative, quotes of a philosophical nature about what science and laws of science really are.

Which leads me to my biggest complaint, and the point which causes me to hesitate to recommend this book to libraries. The religious agenda. So much of the book seems to really be about reconciling the scientific viewpoint with religious and "spiritual" feelings. Nothing is more consistently highlighted in the biographical sections than how religious that particular scientist was. Now I have nothing is particular against attempts to reconcile science and religion (as pointless as think those attempts may be), but to have such an agenda, so clearly and consistently explicated in the text, without making it very clear in the title and descriptions of the book seems to me to be a bit dishonest. For that, I'm not sure if the publishers or Pickover are more at fault but I can only judge by the book that I have in my hands. Buyer beware.

Before I forget: did this book make me smarter? Well, maybe a little. Certainly, I have very little recollection of many of the details of the various laws. On the other hand, I do have much more of a sense and appreciation for the breadth and variety of those laws.



Luminet, Jean-Pierre. The wraparound universe. Wellesley: AK Peters, 2008. 313pp.


Did this book make me smarter? I think so, maybe a little. I've been reading so many popular physics books lately, that some of it might be sinking in.

This one is a bit different from the others in that it tries to make a case for the author's theories on the shape of the universe. The first part of the book is a detailed explication of Luminet's theories with the second part mostly being the background and supplementary information that goes with the first part. The epilogue is basically Luminet's story of how he got his somewhat controversial ideas published.

Not being a physicist, I leave it to you to explore the content of Luminet's ideas. The book is often quite advanced, perhaps a little beyond my cosmology comfort zone. That said, I think I got 50-75% of the book, which isn't bad. You do need to exercise a little attention and concentration and especially to take it in small doses. This book really stretches notions of "popular" science.

In any case, Luminet's lively prose and relaxed style survive Erik Novak's fine translation. I would heartily recommend this to academic libraries but public and school libraries might find it too advanced for most of thier patrons. Go with the Smoot book instead, it's really the best and most entertaining of the bunch as well as being the most appropriate for a mass audience

(The Batterson, Luminet and Pickover books were all provided by the publisher. The Smoot book was a Father's Day gift from my sons.)